6.4. References

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Last update: June 2023

Barataud, M. (2012).  Ecologie acoustique des chiroptères d’Europe, identification des espèces, étude de leurs habitats et comportement de chasse. sl: Biotope, Mèze Muséum national d’Histoire naturelle, Paris. Vol.(collection Inventaire et biodiversité), 344.

Berger‐Tal, Oded, Daniel T. Blumstein, Scott Carroll, Robert N. Fisher, Sarah L. Mesnick, Megan A. Owen, David Saltz, Colleen Cassady Claire & Ronald R. Swaisgood. (2016). A systematic survey of the integration of animal behavior into conservation. Conservation Biology 30 (4): 744‑53. https://doi.org/10.1111/cobi.12654.

Buehler, D. A., Mersmann, T. J., Fraser, J. D., & Seegar, J. K. D., (1991). Nonbreeding Bald Eagle Communal and Solitary Roosting Behavior and Roost Habitat on the Northern Chesapeake Bay. J. Wildl. Manage. 55, 273– 281

Claireau, F., Kerbiriou, C., Charton, F., Braga, C.D.A., Ferraille, T., Julien, J.-F., Machon, N., Allegrini, B., Puechmaille, S.J., Bas, Y., (2021). Bat Overpasses Help Bats to Cross Roads Safely by Increasing Their Flight Height. Acta Chiropterologica 23. https://doi.org/10.3161/15081109ACC2021.23.1.015

Daroux, A., Martignac, F. & Guillard. J. (2014). Utilisation de la caméra acoustique DIDSON pour le suivi en rivière des poissons migrateurs. Cahier des Techniques de l’INRA 83 (3): 1‑8.

Doran GT (1981) There’s a S.M.A.R.T. way to write management’s goals and objectives. Manag Rev 70(11):35

Duggan, Matthew T., Melissa F. Groleau, Ethan P. Shealy, Lillian S. Self, Taylor E. Utter, Matthew M. Waller, Bryan C. Hall, Chris G. Stone, Layne L. Anderson, &Timothy A. Mousseau. (2021). An approach to rapid processing of camera trap images with minimal human input. Ecology and evolution 11 (17): 12051‑63.

Falzon, Greg, Christopher Lawson, Ka-Wai Cheung, Karl Vernes, Guy A. Ballard, Peter J. S. Fleming, Alistair S. Glen, Heath Milne, Atalya Mather-Zardain, & Paul D. Meek. (2019). ClassifyMe: A Field-Scouting Software for the Identification of Wildlife in Camera Trap Images ». Animals 10 (1): 58. https://doi.org/10.3390/ani10010058.

Green, Siân E., Jonathan P. Rees, Philip A. Stephens, Russell A. Hill, & Anthony J. Giordano. (2020). Innovations in Camera Trapping Technology and Approaches: The Integration of Citizen Science and Artificial Intelligence. Animals 10 (1): 132. https://doi.org/10.3390/ani10010132.

 Hellawell, J. M. (1991). Development of a rationale for monitoring. Monitoring for conservation and ecology, 1-14.

Herder, Jelger, A. Valentini, E. Bellemain, T. Dejean, JJCW Van Delft, P. F. Thomsen, & P. Taberlet. (2014). Environmental DNA. A review of the possible applications for the detection of (invasive) species. Nijmegen: Stichting RAVON, 2013‑2104.

Jouventin, Pierre, et Henri Weimerskirch. (1990). Satellite tracking of wandering albatrosses. Nature 343 (6260): 746‑748.

Lindenmayer, D. B., & Likens, G. E. (2010). The science and application of ecological monitoring. Biological conservation, 143(6), 1317-1328.

Marcot, Bruce G., Teresa J. Lorenz, Philip Fischer, Ben G. Weinstein, & Samuel Cowell. (2019). Efficacy of automated detection of motion in wildlife monitoring videos. Wildlife Society Bulletin 43 (4): 726‑36.

Meek, Paul D., Guy-Anthony Ballard, Peter J. S. Fleming, Michael Schaefer, Warwick Williams, & Greg Falzon. (2014). Camera Traps Can Be Heard and Seen by Animals. PLoS ONE 9 (10). https://doi.org/10.1371/journal.pone.0110832.

Murphy et al., (2014): https://www.intrahealth.org/opq/index.html%3Fp=82.html

Norouzzadeh, Mohammad Sadegh, Anh Nguyen, Margaret Kosmala, Alexandra Swanson, Meredith S. Palmer, Craig Packer, & Jeff Clune. (2018). Automatically identifying, counting, and describing wild animals in camera-trap images with deep learning. Proceedings of the National Academy of Sciences 115 (25): E5716‑25. https://doi.org/10.1073/pnas.1719367115.

Norouzzadeh, Mohammad Sadegh, Dan Morris, Sara Beery, Neel Joshi, Nebojsa Jojic, & Jeff Clune. (2021). A deep active learning system for species identification and counting in camera trap images. Methods in ecology and evolution 12 (1): 150‑61.

Ouédraogo D.-Y., Villemey A., Vanpeene S., Coulon A., Azambourg V., Hulard M., Guinard E., Bertheau Y., Flamerie De La Chapelle F., Rauel V., Le Mitouard E., Jeusset A., Vargac M., Witte I., Jactel H., Touroult J., Reyjol Y. & Sordello R., 2020. Can linear transportation infrastructure verges constitute a habitat and/or a corridor for vertebrates in temperate landscapes? A systematic review. Environmental Evidence Journal 9:13, 1-34. https://doi.org/10.1186/s13750-020-00196-7

Price Tack, Jennifer L., Brian S. West, Conor P. McGowan, Stephen S. Ditchkoff, Stanley J. Reeves, Allison C. Keever, & James B. Grand. (2016). AnimalFinder: A Semi-Automated System for Animal Detection in Time-Lapse Camera Trap Images. Ecological Informatics 36 (novembre): 145‑51. https://doi.org/10.1016/j.ecoinf.2016.11.003.

Rigoudy, Noa, Abdelbaki Benyoub, Aurélien Besnard, Carole Birck, Yoann Bollet, Yoann Bunz, Nina De Backer (2022). The DeepFaune Initiative: A Collaborative Effort towards the Automatic Identification of the French Fauna in Camera-Trap Images. Preprint. Ecology. https://doi.org/10.1101/2022.03.15.484324.

Roedenbeck, I. A., Fahrig, L., Findlay, C. S., Houlahan, J. E., Jaeger, J. A., Klar, N., … & Van der Grift, E. A., (2007). The Rauischholzhausen agenda for road ecology. Ecology and society, 12(1).

Rovero, Francesco, Fridolin Zimmermann, Duccio Berzi, & Paul Meek. (2013). “Which Camera Trap Type and How Many Do I Need?” A Review of Camera Features and Study Designs for a Range of Wildlife Research Applications. Hystrix, the Italian Journal of Mammalogy 24 (2): 148‑56. https://doi.org/10.4404/hystrix-24.2-8789.

Sordello, Romain, Yves Bertheau, Aurélie Coulon, Arzhvaël Jeusset, Dakis-Yaoba Ouédraogo, Sylvie Vanpeene, Marianne Vargac, et al. (2019). Les protocoles expérimentaux en écologie – Principaux points clés. MNHN Paris, UMS Patrinat.

Sueur, Jerome & Almo Farina. (2015). Ecoacoustics: The Ecological Investigation and Interpretation of Environmental Sound. Biosemiotics 8 (3): 493‑502. https://doi.org/10.1007/s12304-015-9248-x.

Tabak, Michael A., Mohammad S. Norouzzadeh, David W. Wolfson, Erica J. Newton, Raoul K. Boughton, Jacob S. Ivan, Eric A. Odell, et al. (2020). Improving the Accessibility and Transferability of Machine Learning Algorithms for Identification of Animals in Camera Trap Images: MLWIC2. Ecology and Evolution 10 (19): 10374‑83. https://doi.org/10.1002/ece3.6692.

UMS PatriNat, Muséum National d’Histoire Naturelle, (2016). CAMPanule, CAtalogue de Méthodes et Protocoles https://campanule.mnhn.fr/concepts-et-definitions/

van der Grift, E. A., van der Ree, R., Fahrig, L., Findlay, S., Houlahan, J., Jaeger, J. A. G., Klar, N., Madriñan, L. F., & Olson, L. (2013). Evaluating the effectiveness of road mitigation measures.  Biodiversity and Conservation, 22(2), 425–448. https://doi.org/10.1007/s10531-012-0421-0

Villemey, A., Jeusset, A., Vargac, M., Bertheau, Y., Coulon, A., Touroult, J ., Vanpeene, S., Witté, I., Jactel, H., Deniaud, N., Flamery de Lachapelle, F., Jaslier, E., Roy, V., Guinard, E., Le Mitouard, E., Rauel, V., & Sordello, R., (2017). Can linear transportation infrastructure verges constitute a habitat and/or a corridor for insects in temperate landscapes? A map and a systematic review. Environmental Evidence, 7(5), 1-33. https://doi.org/10.1186/s13750-018-0117-3

Wei, Weideng, Gai Luo, Jianghong Ran, & Jing Li. (2020). Zilong: A tool to identify empty images in camera-trap data. Ecological Informatics 55: 101021.

Wolff, David, David Marks, Walter A. Petersen, & Jason Pippitt. (2017). GPM Ground Validation NASA S-Band Dual Polarimetric (NPOL) Doppler Radar OLYMPEX V2. Archive Center, Huntsville, Alabama, USA doi: http://dx. doi. Org/10.5067/GPMGV/OLYMPEX/NPOL/DATA301.


Camera traps – Semi-automated identification with AI support

Zooniverse : https://www.zooniverse.org/

Zilong https://github.com/0106WeiWeiDeng/Zilong

AnimalFinder  https://www.sciencedirect.com/science/article/abs/pii/S1574954116301121

MotionMeerkat http://benweinstein.weebly.com/motionmeerkat.html

ClassifyMe https://classifymeapp.com/

MLWIC2 https://github.com/mikeyEcology/MLWIC2

DeepFaune https://www.deepfaune.cnrs.fr/


Conservation drones https://conservationdrones.org

Naturalist databases

GBIF: https://www.gbif.org/

iNaturalist : https://www.inaturalist.org/

Ebird:  https://ebird.org/

OpenObs: https://openobs.mnhn.fr/


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